Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.47■■□□□ 1.03
SBNO1A3KN83 AKR7A2P1-201ENST00000460134 915 ntBASIC21.47■■□□□ 1.03
SBNO1A3KN83 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 AC138951.2-201ENST00000623455 1161 ntBASIC21.47■■□□□ 1.03
SBNO1A3KN83 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 AC106820.2-201ENST00000563775 3264 ntBASIC21.46■■□□□ 1.03
SBNO1A3KN83 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 AL138709.1-201ENST00000614840 1693 ntBASIC21.46■■□□□ 1.03
SBNO1A3KN83 AP001282.1-201ENST00000531301 1499 ntBASIC21.46■■□□□ 1.03
SBNO1A3KN83 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 BTBD6P1-201ENST00000412176 1267 ntBASIC21.46■■□□□ 1.03
SBNO1A3KN83 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 BX284668.4-201ENST00000453917 508 ntBASIC21.46■■□□□ 1.03
SBNO1A3KN83 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.46■■□□□ 1.03
SBNO1A3KN83 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SBNO1A3KN83 AC244452.3-201ENST00000636814 210 ntBASIC21.46■■□□□ 1.03
SBNO1A3KN83 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SBNO1A3KN83 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SBNO1A3KN83 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SBNO1A3KN83 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SBNO1A3KN83 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.45■■□□□ 1.03
SBNO1A3KN83 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 CYP2AB1P-202ENST00000454440 1456 ntBASIC21.45■■□□□ 1.02
SBNO1A3KN83 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 NEU3-202ENST00000526068 431 ntTSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 AC105129.2-201ENST00000559536 390 ntBASIC21.45■■□□□ 1.02
SBNO1A3KN83 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 AC015967.2-201ENST00000624092 234 ntBASIC21.45■■□□□ 1.02
SBNO1A3KN83 AC006435.4-201ENST00000625037 234 ntBASIC21.45■■□□□ 1.02
SBNO1A3KN83 AL356737.1-201ENST00000634391 234 ntBASIC21.45■■□□□ 1.02
SBNO1A3KN83 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SBNO1A3KN83 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
SBNO1A3KN83 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 ME2P1-201ENST00000426028 1970 ntBASIC21.44■■□□□ 1.02
SBNO1A3KN83 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms