Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 MIR346-201ENST00000362234 95 ntBASIC18.37■□□□□ 0.53
CLIC4Q9Y696 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 AC079140.1-201ENST00000508039 487 ntBASIC18.37■□□□□ 0.53
CLIC4Q9Y696 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 AL671883.3-201ENST00000603274 991 ntBASIC18.37■□□□□ 0.53
CLIC4Q9Y696 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 AL136982.4-201ENST00000437689 1740 ntBASIC18.37■□□□□ 0.53
CLIC4Q9Y696 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIC4Q9Y696 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 YBX2P1-201ENST00000394192 760 ntBASIC18.36■□□□□ 0.53
CLIC4Q9Y696 AL022342.1-201ENST00000400363 863 ntBASIC18.36■□□□□ 0.53
CLIC4Q9Y696 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 KRT18P58-201ENST00000527480 1120 ntBASIC18.36■□□□□ 0.53
CLIC4Q9Y696 FAM86C2P-203ENST00000528684 1004 ntBASIC18.36■□□□□ 0.53
CLIC4Q9Y696 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 AP000842.3-202ENST00000569238 1080 ntBASIC18.36■□□□□ 0.53
CLIC4Q9Y696 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 AC026120.1-201ENST00000611536 926 ntBASIC18.36■□□□□ 0.53
CLIC4Q9Y696 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLIC4Q9Y696 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AC009090.5-201ENST00000624886 2285 ntBASIC18.35■□□□□ 0.53
CLIC4Q9Y696 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.35■□□□□ 0.53
CLIC4Q9Y696 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms