Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 AC099522.2-201ENST00000607001 744 ntBASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHA3Q9Y5H8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 AL691432.1-201ENST00000596308 1422 ntBASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 SPTSSB-204ENST00000617024 1292 ntBASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 AL513190.1-201ENST00000621254 727 ntBASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHA3Q9Y5H8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 TPM4P1-201ENST00000436100 807 ntBASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 AC112191.1-201ENST00000523689 701 ntBASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 AC024267.1-201ENST00000582320 895 ntBASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHA3Q9Y5H8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms