Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 AC104692.2-201ENST00000603054 253 ntBASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 AC023141.13-201ENST00000604991 943 ntBASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 REXO1L1P-202ENST00000608646 1974 ntBASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 AC013726.1-201ENST00000563747 2285 ntBASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC52A3Q9NQ40 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 AP002414.2-201ENST00000591780 3365 ntBASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 AC004870.1-201ENST00000315132 882 ntBASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 RNA5SP415-201ENST00000517246 115 ntBASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 AL138918.1-201ENST00000568306 659 ntBASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 AC007292.2-201ENST00000593524 1812 ntBASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 OR6D1P-203ENST00000641209 4860 ntBASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC52A3Q9NQ40 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC52A3Q9NQ40 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC52A3Q9NQ40 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC52A3Q9NQ40 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC52A3Q9NQ40 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC52A3Q9NQ40 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms