Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 C2orf27AP3-201ENST00000434123 579 ntBASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 RN7SL560P-201ENST00000577943 264 ntBASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 AL354718.3-201ENST00000616414 581 ntBASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 CR382287.1-201ENST00000623954 586 ntBASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH11XQ9BZA7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 MIR1247-201ENST00000408206 136 ntBASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 CNN2P8-201ENST00000421872 913 ntBASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 AC093813.1-201ENST00000605066 256 ntBASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH11XQ9BZA7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 AC015910.1-201ENST00000579400 975 ntBASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH11XQ9BZA7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 FAM86HP-204ENST00000513466 959 ntBASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms