Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 CNN2P8-201ENST00000421872 913 ntBASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 C2orf69P2-201ENST00000562032 1123 ntBASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 AC009542.2-202ENST00000619004 1067 ntBASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RTFDC1Q9BY42 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 GOLGA2P4-201ENST00000441462 777 ntBASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 AC026410.3-201ENST00000514280 936 ntBASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 AP001282.1-201ENST00000531301 1499 ntBASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTFDC1Q9BY42 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 AGGF1P2-201ENST00000426656 2106 ntBASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 RN7SL560P-201ENST00000577943 264 ntBASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 AC097359.3-201ENST00000603982 1210 ntBASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 ALOX12P2-203ENST00000570921 1945 ntBASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTFDC1Q9BY42 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTFDC1Q9BY42 AC004945.1-201ENST00000416738 983 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms