Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 TK1-204ENST00000590430 683 ntTSL 3 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC104692.2-201ENST00000603054 253 ntBASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 AC006449.6-201ENST00000612330 2296 ntBASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
NDUFAF3Q9BU61 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 AL603832.2-201ENST00000566195 2125 ntBASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 TP73-AS1-210ENST00000637775 1455 ntBASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 AC007967.3-201ENST00000434308 558 ntBASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 AF186996.4-201ENST00000467186 377 ntBASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 AL138831.2-201ENST00000606564 490 ntBASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 CICP23-201ENST00000605013 2741 ntBASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
NDUFAF3Q9BU61 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
NDUFAF3Q9BU61 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NDUFAF3Q9BU61 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.54□□□□□ -0.4
NDUFAF3Q9BU61 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms