Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AC131009.4-201ENST00000624048 1740 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 AC138035.3-201ENST00000622706 2791 ntBASIC9.69□□□□□ -0.86
LIMD2Q9BT23 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
LIMD2Q9BT23 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 ST20-AS1-201ENST00000560255 4223 ntBASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 AC078925.2-201ENST00000624013 1973 ntBASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 HLA-A-202ENST00000376806 1854 ntBASIC9.68□□□□□ -0.86
LIMD2Q9BT23 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 AC002310.6-201ENST00000624451 1377 ntBASIC9.68□□□□□ -0.86
LIMD2Q9BT23 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 MED22-202ENST00000371999 987 ntTSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RPS2P1-201ENST00000434010 821 ntBASIC9.68□□□□□ -0.86
LIMD2Q9BT23 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 DUX4L17-201ENST00000557360 1267 ntBASIC9.68□□□□□ -0.86
LIMD2Q9BT23 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TBCB-205ENST00000585746 875 ntTSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RPS15-207ENST00000591032 550 ntTSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RPS15-212ENST00000593052 629 ntTSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 AC008667.4-201ENST00000607370 168 ntBASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
LIMD2Q9BT23 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 AC006504.4-201ENST00000592118 1568 ntBASIC9.67□□□□□ -0.86
LIMD2Q9BT23 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LIMD2Q9BT23 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms