Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 LINC02447-202ENST00000501888 2146 ntBASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.28■□□□□ 0.04
TUBA1CQ9BQE3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 NORAD-201ENST00000565493 5339 ntBASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 ALG1L5P-201ENST00000482043 771 ntBASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 ACTL9-202ENST00000612068 1252 ntBASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 AL139011.1-202ENST00000642063 584 ntBASIC15.27■□□□□ 0.04
TUBA1CQ9BQE3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 SNX18-202ENST00000343017 3140 ntBASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 SSR4P1-203ENST00000599569 2260 ntBASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.27■□□□□ 0.03
TUBA1CQ9BQE3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 AC016027.1-202ENST00000607927 1699 ntBASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 AC129492.6-201ENST00000611383 1305 ntBASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 AL513480.1-201ENST00000451731 511 ntBASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 AC005829.1-201ENST00000570002 483 ntBASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 AL078644.1-201ENST00000609881 752 ntBASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TUBA1CQ9BQE3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms