Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.81■□□□□ 0.28
SMOQ99835 Z97205.2-201ENST00000564697 1639 ntBASIC16.81■□□□□ 0.28
SMOQ99835 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.81■□□□□ 0.28
SMOQ99835 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMOQ99835 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SMOQ99835 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMOQ99835 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.8■□□□□ 0.28
SMOQ99835 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.8■□□□□ 0.28
SMOQ99835 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
SMOQ99835 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 TARDBPP1-201ENST00000442013 1203 ntBASIC16.8■□□□□ 0.28
SMOQ99835 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.8■□□□□ 0.28
SMOQ99835 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.8■□□□□ 0.28
SMOQ99835 AL589987.1-201ENST00000453380 819 ntBASIC16.8■□□□□ 0.28
SMOQ99835 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.8■□□□□ 0.28
SMOQ99835 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.8■□□□□ 0.28
SMOQ99835 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.8■□□□□ 0.28
SMOQ99835 HNRNPUP1-201ENST00000554987 333 ntBASIC16.8■□□□□ 0.28
SMOQ99835 AC104794.3-201ENST00000566840 1248 ntBASIC16.8■□□□□ 0.28
SMOQ99835 AC097359.3-201ENST00000603982 1210 ntBASIC16.8■□□□□ 0.28
SMOQ99835 AC074044.1-201ENST00000609673 707 ntBASIC16.8■□□□□ 0.28
SMOQ99835 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.8■□□□□ 0.28
SMOQ99835 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.8■□□□□ 0.28
SMOQ99835 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.8■□□□□ 0.28
SMOQ99835 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMOQ99835 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SMOQ99835 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMOQ99835 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMOQ99835 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SMOQ99835 AC010491.1-201ENST00000563101 2797 ntBASIC16.79■□□□□ 0.28
SMOQ99835 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.79■□□□□ 0.28
SMOQ99835 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMOQ99835 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.79■□□□□ 0.28
SMOQ99835 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.79■□□□□ 0.28
SMOQ99835 GNAQP1-201ENST00000444815 1067 ntBASIC16.79■□□□□ 0.28
SMOQ99835 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.79■□□□□ 0.28
SMOQ99835 TERF1P3-201ENST00000505638 1227 ntBASIC16.79■□□□□ 0.28
SMOQ99835 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.79■□□□□ 0.28
SMOQ99835 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.79■□□□□ 0.28
SMOQ99835 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.79■□□□□ 0.28
SMOQ99835 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.79■□□□□ 0.28
SMOQ99835 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SMOQ99835 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 AC018695.7-201ENST00000624587 2492 ntBASIC16.79■□□□□ 0.28
SMOQ99835 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMOQ99835 AC026691.1-201ENST00000602502 2017 ntBASIC16.79■□□□□ 0.28
SMOQ99835 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SMOQ99835 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.79■□□□□ 0.28
SMOQ99835 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMOQ99835 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMOQ99835 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SMOQ99835 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.78■□□□□ 0.28
SMOQ99835 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.78■□□□□ 0.28
SMOQ99835 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMOQ99835 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMOQ99835 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms