Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD9AQ99638 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.04■□□□□ 0.32
RAD9AQ99638 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD9AQ99638 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD9AQ99638 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD9AQ99638 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AL592424.1-201ENST00000563624 1536 ntBASIC17.03■□□□□ 0.32
RAD9AQ99638 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.03■□□□□ 0.32
RAD9AQ99638 CNN2P8-201ENST00000421872 913 ntBASIC17.03■□□□□ 0.32
RAD9AQ99638 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.03■□□□□ 0.32
RAD9AQ99638 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD9AQ99638 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAD9AQ99638 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RAD9AQ99638 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD9AQ99638 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAD9AQ99638 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.02■□□□□ 0.32
RAD9AQ99638 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.02■□□□□ 0.32
RAD9AQ99638 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RAD9AQ99638 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.02■□□□□ 0.32
RAD9AQ99638 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAD9AQ99638 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAD9AQ99638 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.02■□□□□ 0.32
RAD9AQ99638 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.02■□□□□ 0.32
RAD9AQ99638 MIR326-201ENST00000362220 95 ntBASIC17.02■□□□□ 0.32
RAD9AQ99638 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RAD9AQ99638 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.02■□□□□ 0.32
RAD9AQ99638 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 FAM86HP-204ENST00000513466 959 ntBASIC17.02■□□□□ 0.32
RAD9AQ99638 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.02■□□□□ 0.32
RAD9AQ99638 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD9AQ99638 AC060834.1-201ENST00000443027 2032 ntBASIC17.02■□□□□ 0.32
RAD9AQ99638 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAD9AQ99638 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAD9AQ99638 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RAD9AQ99638 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RAD9AQ99638 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAD9AQ99638 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RAD9AQ99638 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAD9AQ99638 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAD9AQ99638 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RAD9AQ99638 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.01■□□□□ 0.31
RAD9AQ99638 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
RAD9AQ99638 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAD9AQ99638 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RAD9AQ99638 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAD9AQ99638 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAD9AQ99638 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAD9AQ99638 CALR4P-201ENST00000431943 946 ntBASIC17.01■□□□□ 0.31
RAD9AQ99638 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.01■□□□□ 0.31
RAD9AQ99638 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.01■□□□□ 0.31
RAD9AQ99638 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms