Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.7■□□□□ 0.1
PKP4Q99569 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.7■□□□□ 0.1
PKP4Q99569 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PKP4Q99569 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 AL691432.1-201ENST00000596308 1422 ntBASIC15.69■□□□□ 0.1
PKP4Q99569 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.69■□□□□ 0.1
PKP4Q99569 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 AC132872.4-202ENST00000622924 2756 ntBASIC15.69■□□□□ 0.1
PKP4Q99569 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
PKP4Q99569 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 HLA-J-203ENST00000494367 1087 ntBASIC15.69■□□□□ 0.1
PKP4Q99569 AC109322.1-201ENST00000524499 1264 ntBASIC15.69■□□□□ 0.1
PKP4Q99569 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
PKP4Q99569 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.69■□□□□ 0.1
PKP4Q99569 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 AC006538.3-201ENST00000612495 578 ntBASIC15.69■□□□□ 0.1
PKP4Q99569 AC003101.2-201ENST00000612557 442 ntBASIC15.69■□□□□ 0.1
PKP4Q99569 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PKP4Q99569 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PKP4Q99569 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.69■□□□□ 0.1
PKP4Q99569 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.69■□□□□ 0.1
PKP4Q99569 AC134407.2-201ENST00000625089 1978 ntBASIC15.69■□□□□ 0.1
PKP4Q99569 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PKP4Q99569 AL136982.4-201ENST00000437689 1740 ntBASIC15.68■□□□□ 0.1
PKP4Q99569 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 AL162727.3-201ENST00000635661 2787 ntBASIC15.68■□□□□ 0.1
PKP4Q99569 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 AP001282.1-201ENST00000531301 1499 ntBASIC15.68■□□□□ 0.1
PKP4Q99569 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PKP4Q99569 TSEN15P1-201ENST00000423257 515 ntBASIC15.68■□□□□ 0.1
PKP4Q99569 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.68■□□□□ 0.1
PKP4Q99569 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PKP4Q99569 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PKP4Q99569 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PKP4Q99569 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.68■□□□□ 0.1
PKP4Q99569 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.68■□□□□ 0.1
PKP4Q99569 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PKP4Q99569 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PKP4Q99569 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms