Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 AC020907.1-201ENST00000616460 1350 ntBASIC17.19■□□□□ 0.34
YME1L1Q96TA2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 SOCS2P1-201ENST00000417727 557 ntBASIC17.19■□□□□ 0.34
YME1L1Q96TA2 AC134915.1-201ENST00000426461 574 ntBASIC17.19■□□□□ 0.34
YME1L1Q96TA2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 RPL7P3-201ENST00000441388 714 ntBASIC17.19■□□□□ 0.34
YME1L1Q96TA2 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 RPL13AP25-201ENST00000484130 612 ntBASIC17.19■□□□□ 0.34
YME1L1Q96TA2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
YME1L1Q96TA2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 INTS4P2-202ENST00000614726 2019 ntBASIC17.18■□□□□ 0.34
YME1L1Q96TA2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
YME1L1Q96TA2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AC092933.1-201ENST00000393644 945 ntBASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AP001889.1-201ENST00000525414 633 ntBASIC17.17■□□□□ 0.34
YME1L1Q96TA2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 AC068587.10-201ENST00000641210 219 ntBASIC17.17■□□□□ 0.34
YME1L1Q96TA2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
YME1L1Q96TA2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms