Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 AC044860.1-202ENST00000559481 777 ntBASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP1Q96SZ6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 PIN1P1-201ENST00000412108 996 ntBASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 SPTLC1P1-201ENST00000447199 261 ntBASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 AC190387.1-201ENST00000551683 408 ntBASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.66■□□□□ 0.26
CDK5RAP1Q96SZ6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 AC025048.3-201ENST00000590609 569 ntBASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 AC005702.4-201ENST00000618393 416 ntBASIC16.65■□□□□ 0.26
CDK5RAP1Q96SZ6 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms