Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 CICP13-201ENST00000422015 2789 ntBASIC13.13□□□□□ -0.31
RAB40CQ96S21 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 TCAF2P1-201ENST00000291129 2421 ntBASIC13.12□□□□□ -0.31
RAB40CQ96S21 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AC139887.3-201ENST00000568585 713 ntBASIC13.12□□□□□ -0.31
RAB40CQ96S21 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AL139288.1-201ENST00000623748 933 ntBASIC13.12□□□□□ -0.31
RAB40CQ96S21 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 AC129492.6-201ENST00000611383 1305 ntBASIC13.12□□□□□ -0.31
RAB40CQ96S21 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RAB40CQ96S21 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
RAB40CQ96S21 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 SLC25A6P2-201ENST00000497974 877 ntBASIC13.11□□□□□ -0.31
RAB40CQ96S21 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 AC107918.2-201ENST00000530817 355 ntBASIC13.11□□□□□ -0.31
RAB40CQ96S21 AC012615.1-201ENST00000565797 1299 ntBASIC13.11□□□□□ -0.31
RAB40CQ96S21 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.11□□□□□ -0.31
RAB40CQ96S21 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RAB40CQ96S21 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms