Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT140Q96RY7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
IFT140Q96RY7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT140Q96RY7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
IFT140Q96RY7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT140Q96RY7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 POM121L8P-201ENST00000417732 1281 ntBASIC25.97■■□□□ 1.75
IFT140Q96RY7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 POM121L9P-203ENST00000441984 1285 ntBASIC25.97■■□□□ 1.75
IFT140Q96RY7 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 AC106820.3-201ENST00000561653 397 ntBASIC25.97■■□□□ 1.75
IFT140Q96RY7 AC135983.4-201ENST00000564116 1262 ntBASIC25.97■■□□□ 1.75
IFT140Q96RY7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 WT1-AS_6.1-201ENST00000614919 121 ntBASIC25.97■■□□□ 1.75
IFT140Q96RY7 AL805961.1-203ENST00000641078 1258 ntBASIC25.97■■□□□ 1.75
IFT140Q96RY7 FST-202ENST00000396947 2538 ntTSL 5 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
IFT140Q96RY7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC25.96■■□□□ 1.75
IFT140Q96RY7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
IFT140Q96RY7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC25.96■■□□□ 1.75
IFT140Q96RY7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
IFT140Q96RY7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
IFT140Q96RY7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
IFT140Q96RY7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
IFT140Q96RY7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC25.95■■□□□ 1.74
IFT140Q96RY7 AC026316.1-201ENST00000398900 414 ntBASIC25.95■■□□□ 1.74
IFT140Q96RY7 AC100850.1-201ENST00000506768 649 ntBASIC25.95■■□□□ 1.74
IFT140Q96RY7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC25.95■■□□□ 1.74
IFT140Q96RY7 AC020922.3-201ENST00000595064 547 ntBASIC25.95■■□□□ 1.74
IFT140Q96RY7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
IFT140Q96RY7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
IFT140Q96RY7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
IFT140Q96RY7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
IFT140Q96RY7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
IFT140Q96RY7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 RN7SL8P-201ENST00000461771 266 ntBASIC25.94■■□□□ 1.74
IFT140Q96RY7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 CTBP2P4-201ENST00000513884 920 ntBASIC25.94■■□□□ 1.74
IFT140Q96RY7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 OR10B1P-201ENST00000601666 907 ntBASIC25.94■■□□□ 1.74
IFT140Q96RY7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 AC006453.1-201ENST00000636037 1257 ntBASIC25.94■■□□□ 1.74
IFT140Q96RY7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
IFT140Q96RY7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
IFT140Q96RY7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC25.93■■□□□ 1.74
IFT140Q96RY7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC25.93■■□□□ 1.74
IFT140Q96RY7 AC006335.1-201ENST00000445200 547 ntBASIC25.93■■□□□ 1.74
IFT140Q96RY7 AL353637.1-201ENST00000451571 732 ntBASIC25.93■■□□□ 1.74
IFT140Q96RY7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 AL391280.1-201ENST00000506969 1062 ntBASIC25.93■■□□□ 1.74
IFT140Q96RY7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
IFT140Q96RY7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
IFT140Q96RY7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC25.93■■□□□ 1.74
IFT140Q96RY7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
IFT140Q96RY7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
IFT140Q96RY7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC25.93■■□□□ 1.74
IFT140Q96RY7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC25.92■■□□□ 1.74
IFT140Q96RY7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms