Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 EEF1DP6-201ENST00000449232 372 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 RN7SL11P-201ENST00000471305 293 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AC005357.2-202ENST00000590507 1060 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AL451050.2-201ENST00000606967 682 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AF254983.2-201ENST00000612331 135 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AC138649.2-201ENST00000615886 705 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AL353726.2-201ENST00000623259 884 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 LETM1P2-201ENST00000597330 2178 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 YRDCP1-201ENST00000621419 643 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 SNX33P1-201ENST00000592116 1762 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 AC015818.8-201ENST00000587907 1519 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD1Q96PZ7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 SLC25A1P3-201ENST00000395415 828 ntBASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 AC093724.1-201ENST00000448659 1027 ntBASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 AGGF1P2-201ENST00000426656 2106 ntBASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 FAM86LP-201ENST00000478302 853 ntBASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 RN7SL574P-201ENST00000581512 297 ntBASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 AL031731.1-201ENST00000642131 2094 ntBASIC13.48□□□□□ -0.25
CSMD1Q96PZ7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.47□□□□□ -0.25
CSMD1Q96PZ7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms