Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 AC004987.2-201ENST00000395959 1148 ntBASIC19.05■□□□□ 0.64
NEK1Q96PY6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 AC254562.1-201ENST00000417586 456 ntBASIC19.05■□□□□ 0.64
NEK1Q96PY6 RBPMS2P1-201ENST00000437762 623 ntBASIC19.05■□□□□ 0.64
NEK1Q96PY6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 AL162727.3-201ENST00000635661 2787 ntBASIC19.05■□□□□ 0.64
NEK1Q96PY6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.04■□□□□ 0.64
NEK1Q96PY6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AP006288.1-201ENST00000446065 395 ntBASIC19.04■□□□□ 0.64
NEK1Q96PY6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AL139010.1-201ENST00000454878 894 ntBASIC19.04■□□□□ 0.64
NEK1Q96PY6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 AC009093.7-201ENST00000623853 1223 ntBASIC19.04■□□□□ 0.64
NEK1Q96PY6 AC134684.3-201ENST00000641758 218 ntBASIC19.04■□□□□ 0.64
NEK1Q96PY6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NEK1Q96PY6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NEK1Q96PY6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 AC023141.5-201ENST00000458585 616 ntBASIC19.03■□□□□ 0.64
NEK1Q96PY6 AC026150.2-201ENST00000564693 1156 ntBASIC19.03■□□□□ 0.64
NEK1Q96PY6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 AC018529.1-201ENST00000613063 361 ntBASIC19.03■□□□□ 0.64
NEK1Q96PY6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NEK1Q96PY6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.03■□□□□ 0.64
NEK1Q96PY6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms