Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC004706.3-202ENST00000621574 984 ntBASIC13.9□□□□□ -0.18
CMTM3Q96MX0 AL139288.1-201ENST00000623748 933 ntBASIC13.9□□□□□ -0.18
CMTM3Q96MX0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 AC016734.2-201ENST00000624325 1377 ntBASIC13.9□□□□□ -0.18
CMTM3Q96MX0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMTM3Q96MX0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CMTM3Q96MX0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CMTM3Q96MX0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CMTM3Q96MX0 KRT18P1-202ENST00000452408 1331 ntBASIC13.9□□□□□ -0.19
CMTM3Q96MX0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 TPSP2-201ENST00000561760 610 ntBASIC13.89□□□□□ -0.19
CMTM3Q96MX0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 MIR3909-201ENST00000579518 119 ntBASIC13.89□□□□□ -0.19
CMTM3Q96MX0 MIR5100-201ENST00000579544 119 ntBASIC13.89□□□□□ -0.19
CMTM3Q96MX0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 AL805961.1-202ENST00000641562 540 ntBASIC13.89□□□□□ -0.19
CMTM3Q96MX0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMTM3Q96MX0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 AP002414.2-201ENST00000591780 3365 ntBASIC13.88□□□□□ -0.19
CMTM3Q96MX0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.88□□□□□ -0.19
CMTM3Q96MX0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.88□□□□□ -0.19
CMTM3Q96MX0 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms