Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 AC244107.1-201ENST00000442033 332 ntBASIC18.65■□□□□ 0.58
CCDC17Q96LX7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 GIMAP3P-201ENST00000495150 836 ntBASIC18.65■□□□□ 0.58
CCDC17Q96LX7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SLED1-202ENST00000512051 380 ntBASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 AC092552.1-201ENST00000547243 906 ntBASIC18.65■□□□□ 0.58
CCDC17Q96LX7 MIR8072-201ENST00000614241 80 ntBASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 PCDHA14-201ENST00000506751 2298 ntBASIC18.65■□□□□ 0.58
CCDC17Q96LX7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC17Q96LX7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC17Q96LX7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC17Q96LX7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC17Q96LX7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 IGHV3-72-202ENST00000621503 303 ntBASIC18.64■□□□□ 0.57
CCDC17Q96LX7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 CLK3P2-201ENST00000427566 1453 ntBASIC18.64■□□□□ 0.57
CCDC17Q96LX7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC17Q96LX7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.63■□□□□ 0.57
CCDC17Q96LX7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 AL596087.1-201ENST00000400979 1969 ntBASIC18.63■□□□□ 0.57
CCDC17Q96LX7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC17Q96LX7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC17Q96LX7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms