Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.9□□□□□ -0.02
CNOT9Q92600 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CNOT9Q92600 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CNOT9Q92600 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CNOT9Q92600 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CNOT9Q92600 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.89□□□□□ -0.03
CNOT9Q92600 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.89□□□□□ -0.03
CNOT9Q92600 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.89□□□□□ -0.03
CNOT9Q92600 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CNOT9Q92600 YBX2P1-201ENST00000394192 760 ntBASIC14.89□□□□□ -0.03
CNOT9Q92600 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CNOT9Q92600 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.89□□□□□ -0.03
CNOT9Q92600 AC105233.2-201ENST00000523697 349 ntBASIC14.89□□□□□ -0.03
CNOT9Q92600 FAM86C2P-203ENST00000528684 1004 ntBASIC14.89□□□□□ -0.03
CNOT9Q92600 AF228730.5-201ENST00000530288 346 ntBASIC14.89□□□□□ -0.03
CNOT9Q92600 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 AC243562.1-201ENST00000560672 389 ntBASIC14.89□□□□□ -0.03
CNOT9Q92600 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.89□□□□□ -0.03
CNOT9Q92600 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.89□□□□□ -0.03
CNOT9Q92600 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 C20orf181-201ENST00000623918 480 ntBASIC14.89□□□□□ -0.03
CNOT9Q92600 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.89□□□□□ -0.03
CNOT9Q92600 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
CNOT9Q92600 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CNOT9Q92600 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CNOT9Q92600 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.89□□□□□ -0.03
CNOT9Q92600 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.89□□□□□ -0.03
CNOT9Q92600 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CNOT9Q92600 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CNOT9Q92600 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CNOT9Q92600 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CNOT9Q92600 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 GPX1P2-201ENST00000429271 606 ntBASIC14.88□□□□□ -0.03
CNOT9Q92600 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.88□□□□□ -0.03
CNOT9Q92600 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.88□□□□□ -0.03
CNOT9Q92600 ALG1L5P-201ENST00000482043 771 ntBASIC14.88□□□□□ -0.03
CNOT9Q92600 AC098859.1-201ENST00000502915 1238 ntBASIC14.88□□□□□ -0.03
CNOT9Q92600 KRT8P48-201ENST00000515599 1220 ntBASIC14.88□□□□□ -0.03
CNOT9Q92600 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.88□□□□□ -0.03
CNOT9Q92600 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 SPTSSB-204ENST00000617024 1292 ntBASIC14.88□□□□□ -0.03
CNOT9Q92600 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 AC008267.7-201ENST00000624570 1194 ntBASIC14.88□□□□□ -0.03
CNOT9Q92600 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.88□□□□□ -0.03
CNOT9Q92600 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CNOT9Q92600 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms