Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 AP001282.1-201ENST00000531301 1499 ntBASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.84■□□□□ 0.61
SMARCC2Q8TAQ2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.83■□□□□ 0.61
SMARCC2Q8TAQ2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCC2Q8TAQ2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.83■□□□□ 0.61
SMARCC2Q8TAQ2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCC2Q8TAQ2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCC2Q8TAQ2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMARCC2Q8TAQ2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SMARCC2Q8TAQ2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 CYMP-203ENST00000474680 1263 ntBASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 AL512356.2-201ENST00000546955 174 ntBASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 SPTSSB-204ENST00000617024 1292 ntBASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMARCC2Q8TAQ2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 SPDYE7P-202ENST00000420373 878 ntBASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 CNN2P2-201ENST00000443536 909 ntBASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 CNN2P3-201ENST00000450201 906 ntBASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 AC069262.1-201ENST00000539058 672 ntBASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 AL355385.1-201ENST00000606123 409 ntBASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 MIR6080-201ENST00000617359 66 ntBASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 AL136317.3-201ENST00000618497 906 ntBASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SMARCC2Q8TAQ2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 1745.1 ms