Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 SNHG9-202ENST00000564014 471 ntBASIC17.17■□□□□ 0.34
LMO3Q8TAP4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.17■□□□□ 0.34
LMO3Q8TAP4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LMO3Q8TAP4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 AL035456.1-201ENST00000456064 1369 ntBASIC17.16■□□□□ 0.34
LMO3Q8TAP4 KRT8P12-202ENST00000472924 1397 ntBASIC17.16■□□□□ 0.34
LMO3Q8TAP4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 MIR1233-2-201ENST00000408138 82 ntBASIC17.16■□□□□ 0.34
LMO3Q8TAP4 MIR1233-1-201ENST00000408722 82 ntBASIC17.16■□□□□ 0.34
LMO3Q8TAP4 AC136604.1-201ENST00000418535 575 ntBASIC17.16■□□□□ 0.34
LMO3Q8TAP4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 MIR6080-201ENST00000617359 66 ntBASIC17.16■□□□□ 0.34
LMO3Q8TAP4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.16■□□□□ 0.34
LMO3Q8TAP4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LMO3Q8TAP4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms