Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.28■□□□□ 0.36
BEST2Q8NFU1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 HIST3H2BA-201ENST00000436555 524 ntBASIC17.27■□□□□ 0.36
BEST2Q8NFU1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 SERBP1P5-201ENST00000510079 1181 ntBASIC17.27■□□□□ 0.36
BEST2Q8NFU1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 AC044860.1-202ENST00000559481 777 ntBASIC17.27■□□□□ 0.36
BEST2Q8NFU1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.27■□□□□ 0.36
BEST2Q8NFU1 AC134407.2-201ENST00000625089 1978 ntBASIC17.27■□□□□ 0.36
BEST2Q8NFU1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.27■□□□□ 0.35
BEST2Q8NFU1 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC084018.2-201ENST00000613093 2607 ntBASIC17.26■□□□□ 0.35
BEST2Q8NFU1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC006449.5-201ENST00000610658 2098 ntBASIC17.26■□□□□ 0.35
BEST2Q8NFU1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC015922.1-201ENST00000421102 1152 ntBASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC135586.1-201ENST00000539323 574 ntBASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AF228730.6-201ENST00000641497 218 ntBASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC084121.3-201ENST00000641716 218 ntBASIC17.26■□□□□ 0.35
BEST2Q8NFU1 AC105233.6-201ENST00000642093 218 ntBASIC17.26■□□□□ 0.35
BEST2Q8NFU1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
BEST2Q8NFU1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms