Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC092658.1-201ENST00000505836 891 ntBASIC19.68■□□□□ 0.74
RTL9Q8NET4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.68■□□□□ 0.74
RTL9Q8NET4 AC008735.3-201ENST00000596646 500 ntBASIC19.68■□□□□ 0.74
RTL9Q8NET4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RTL9Q8NET4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 AC011676.5-201ENST00000624864 2660 ntBASIC19.67■□□□□ 0.74
RTL9Q8NET4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL9Q8NET4 AC015936.2-201ENST00000593177 259 ntBASIC19.67■□□□□ 0.74
RTL9Q8NET4 MIR6775-201ENST00000617557 69 ntBASIC19.67■□□□□ 0.74
RTL9Q8NET4 AL033527.5-201ENST00000641382 801 ntBASIC19.67■□□□□ 0.74
RTL9Q8NET4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL9Q8NET4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.66■□□□□ 0.74
RTL9Q8NET4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 AC000095.1-201ENST00000603208 874 ntBASIC19.66■□□□□ 0.74
RTL9Q8NET4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.66■□□□□ 0.74
RTL9Q8NET4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL9Q8NET4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL9Q8NET4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL9Q8NET4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 CROCCP4-201ENST00000457096 498 ntBASIC19.65■□□□□ 0.74
RTL9Q8NET4 FAM86LP-201ENST00000478302 853 ntBASIC19.65■□□□□ 0.74
RTL9Q8NET4 USP32P1-208ENST00000506594 1164 ntBASIC19.65■□□□□ 0.74
RTL9Q8NET4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.65■□□□□ 0.74
RTL9Q8NET4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms