Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.14■□□□□ 0.01
ARHGEF39Q8N4T4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 PHKG1P2-201ENST00000457537 863 ntBASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 SERBP1P5-201ENST00000510079 1181 ntBASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 SPDYE18-201ENST00000510091 1050 ntBASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 MIR3197-201ENST00000582241 73 ntBASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 AC026691.1-201ENST00000602502 2017 ntBASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.13■□□□□ 0.01
ARHGEF39Q8N4T4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AC236430.1-201ENST00000402231 743 ntBASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AC092364.2-202ENST00000597012 1073 ntBASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AL109936.8-201ENST00000641772 604 ntBASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AC018892.3-201ENST00000623986 2499 ntBASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 AL513523.2-202ENST00000427283 2040 ntBASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ARHGEF39Q8N4T4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 RPL13P2-201ENST00000440687 659 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 TARDBPP1-201ENST00000442013 1203 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms