Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 AL139010.1-201ENST00000454878 894 ntBASIC16.35■□□□□ 0.21
PGBD3Q8N328 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 AC061975.2-201ENST00000581722 295 ntBASIC16.35■□□□□ 0.21
PGBD3Q8N328 AC017083.2-201ENST00000608069 979 ntBASIC16.35■□□□□ 0.21
PGBD3Q8N328 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 IGHV3-72-202ENST00000621503 303 ntBASIC16.35■□□□□ 0.21
PGBD3Q8N328 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PGBD3Q8N328 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PGBD3Q8N328 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 AC055876.2-201ENST00000531834 546 ntBASIC16.34■□□□□ 0.21
PGBD3Q8N328 WASH4P-201ENST00000564273 1246 ntBASIC16.34■□□□□ 0.21
PGBD3Q8N328 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 AC004461.2-201ENST00000629517 803 ntBASIC16.34■□□□□ 0.21
PGBD3Q8N328 AL109936.8-201ENST00000641772 604 ntBASIC16.34■□□□□ 0.21
PGBD3Q8N328 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 SLC7A15P-201ENST00000424028 1363 ntBASIC16.34■□□□□ 0.21
PGBD3Q8N328 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PGBD3Q8N328 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.34■□□□□ 0.21
PGBD3Q8N328 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PGBD3Q8N328 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PGBD3Q8N328 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PGBD3Q8N328 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PGBD3Q8N328 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.33■□□□□ 0.21
PGBD3Q8N328 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PGBD3Q8N328 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.33■□□□□ 0.21
PGBD3Q8N328 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PGBD3Q8N328 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.33■□□□□ 0.21
PGBD3Q8N328 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PGBD3Q8N328 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.33■□□□□ 0.21
PGBD3Q8N328 AL031731.1-201ENST00000642131 2094 ntBASIC16.33■□□□□ 0.21
PGBD3Q8N328 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PGBD3Q8N328 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 AC114501.2-201ENST00000439631 535 ntBASIC16.33■□□□□ 0.2
PGBD3Q8N328 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 SRD5A3P1-201ENST00000603021 949 ntBASIC16.33■□□□□ 0.2
PGBD3Q8N328 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PGBD3Q8N328 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PGBD3Q8N328 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms