Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 AC011676.5-201ENST00000624864 2660 ntBASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS3Q8IXF0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 UBALD1-205ENST00000590891 2641 ntBASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 FAM86MP-201ENST00000340703 885 ntBASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS3Q8IXF0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 PDIA3P1-201ENST00000471856 1510 ntBASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 FAM86LP-201ENST00000478302 853 ntBASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 BRI3BPP1-201ENST00000594224 787 ntBASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 AC084018.2-201ENST00000613093 2607 ntBASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NPAS3Q8IXF0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 ACTG1P3-201ENST00000431775 1114 ntBASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 CTBP2P5-201ENST00000454986 1264 ntBASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 AL359711.2-201ENST00000563105 872 ntBASIC16.55■□□□□ 0.24
NPAS3Q8IXF0 MIR4525-201ENST00000580000 75 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms