Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC011676.5-201ENST00000624864 2660 ntBASIC17.36■□□□□ 0.37
HERC6Q8IVU3 AL031731.1-201ENST00000642131 2094 ntBASIC17.36■□□□□ 0.37
HERC6Q8IVU3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HERC6Q8IVU3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 AP002490.2-201ENST00000524791 560 ntBASIC17.35■□□□□ 0.37
HERC6Q8IVU3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HERC6Q8IVU3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 AC005229.1-201ENST00000392885 409 ntBASIC17.34■□□□□ 0.37
HERC6Q8IVU3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.34■□□□□ 0.37
HERC6Q8IVU3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HERC6Q8IVU3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 307.8 ms