Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 TPRX2P-201ENST00000535362 881 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 AC123567.1-201ENST00000548294 1261 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 AC008735.3-201ENST00000596646 500 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 SRD5A3P1-201ENST00000603021 949 ntBASIC17.08■□□□□ 0.32
RNF135Q8IUD6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF135Q8IUD6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 AL671710.1-201ENST00000610245 2349 ntBASIC17.07■□□□□ 0.32
RNF135Q8IUD6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.07■□□□□ 0.32
RNF135Q8IUD6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.07■□□□□ 0.32
RNF135Q8IUD6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF135Q8IUD6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.06■□□□□ 0.32
RNF135Q8IUD6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 AC020907.1-201ENST00000616460 1350 ntBASIC17.06■□□□□ 0.32
RNF135Q8IUD6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms