Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 AC087499.6-201ENST00000411576 835 ntBASIC17.91■□□□□ 0.46
TRIM50Q86XT4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 AC098850.1-201ENST00000419919 790 ntBASIC17.91■□□□□ 0.46
TRIM50Q86XT4 INE1-201ENST00000456273 945 ntBASIC17.91■□□□□ 0.46
TRIM50Q86XT4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM50Q86XT4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM50Q86XT4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.89■□□□□ 0.46
TRIM50Q86XT4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
TRIM50Q86XT4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
TRIM50Q86XT4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 FO393414.2-201ENST00000405153 598 ntBASIC17.89■□□□□ 0.45
TRIM50Q86XT4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 AC092337.1-201ENST00000568699 1129 ntBASIC17.89■□□□□ 0.45
TRIM50Q86XT4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 LINC01115-203ENST00000606068 577 ntBASIC17.89■□□□□ 0.45
TRIM50Q86XT4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRIM50Q86XT4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM50Q86XT4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms