Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP50Q70EL3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP50Q70EL3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.67■□□□□ 0.58
USP50Q70EL3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP50Q70EL3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.67■□□□□ 0.58
USP50Q70EL3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP50Q70EL3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.67■□□□□ 0.58
USP50Q70EL3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.67■□□□□ 0.58
USP50Q70EL3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.67■□□□□ 0.58
USP50Q70EL3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP50Q70EL3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 AL008707.1-201ENST00000422498 534 ntBASIC18.67■□□□□ 0.58
USP50Q70EL3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
USP50Q70EL3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.67■□□□□ 0.58
USP50Q70EL3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.67■□□□□ 0.58
USP50Q70EL3 AL354989.2-201ENST00000435838 1540 ntBASIC18.67■□□□□ 0.58
USP50Q70EL3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP50Q70EL3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
USP50Q70EL3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP50Q70EL3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.67■□□□□ 0.58
USP50Q70EL3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP50Q70EL3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.66■□□□□ 0.58
USP50Q70EL3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.66■□□□□ 0.58
USP50Q70EL3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP50Q70EL3 AL133267.1-201ENST00000398220 340 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 RPL17P11-201ENST00000417593 544 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 AC079178.1-201ENST00000420915 656 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
USP50Q70EL3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.66■□□□□ 0.58
USP50Q70EL3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.66■□□□□ 0.58
USP50Q70EL3 RN7SL48P-201ENST00000579283 293 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 AC007663.3-201ENST00000609632 465 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.66■□□□□ 0.58
USP50Q70EL3 AL353726.2-201ENST00000623259 884 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 BX539320.1-201ENST00000623759 877 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC18.66■□□□□ 0.58
USP50Q70EL3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.66■□□□□ 0.58
USP50Q70EL3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
USP50Q70EL3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.66■□□□□ 0.58
USP50Q70EL3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP50Q70EL3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP50Q70EL3 AL023775.1-201ENST00000454907 1746 ntBASIC18.66■□□□□ 0.58
USP50Q70EL3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.66■□□□□ 0.58
USP50Q70EL3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
USP50Q70EL3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.65■□□□□ 0.58
USP50Q70EL3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP50Q70EL3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.65■□□□□ 0.58
USP50Q70EL3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 NKAIN1P1-201ENST00000435754 582 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 SPTLC1P5-201ENST00000450718 252 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.65■□□□□ 0.58
USP50Q70EL3 ATP6V0CP2-201ENST00000469409 207 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 FTLP10-202ENST00000505798 471 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.65■□□□□ 0.58
USP50Q70EL3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.65■□□□□ 0.58
USP50Q70EL3 ECM1P1-201ENST00000604092 1279 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 AC244157.2-201ENST00000616239 1006 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 AL138799.1-201ENST00000448213 1675 ntBASIC18.65■□□□□ 0.58
USP50Q70EL3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP50Q70EL3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
USP50Q70EL3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms