Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AC106886.4-201ENST00000623557 2502 ntBASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AZGP1P1-201ENST00000411909 902 ntBASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AL359881.2-201ENST00000602973 570 ntBASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 AC093726.1-201ENST00000608064 963 ntBASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC62Q6P9F0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 REXO1L8P-201ENST00000604378 1897 ntBASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 AC011495.1-201ENST00000498085 584 ntBASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 RARRES2P5-201ENST00000564013 466 ntBASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 AL391069.4-201ENST00000609583 481 ntBASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 MIR8072-201ENST00000614241 80 ntBASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC62Q6P9F0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 AC079776.1-201ENST00000401540 1152 ntBASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 RN7SL837P-201ENST00000463010 287 ntBASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 TIMM17BP1-201ENST00000545713 516 ntBASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 AC243562.2-201ENST00000561247 970 ntBASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 TMEM261P1-201ENST00000604899 340 ntBASIC18.03■□□□□ 0.48
CCDC62Q6P9F0 AL162274.1-201ENST00000617191 1098 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms