Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD4Q5XG99 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 PCDHB18P-201ENST00000524813 2368 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC005915.1-201ENST00000624912 2018 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 KRT90P-201ENST00000549264 1064 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 RN7SL560P-201ENST00000577943 264 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC091271.1-201ENST00000611877 1162 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC244669.2-201ENST00000612320 853 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AC005252.2-201ENST00000624630 1141 ntBASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD4Q5XG99 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
LYSMD4Q5XG99 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.64■□□□□ 0.1
LYSMD4Q5XG99 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 MSTO2P-201ENST00000314835 1709 ntBASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 HLA-A-202ENST00000376806 1854 ntBASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 MIR1247-201ENST00000408206 136 ntBASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 AC026954.1-201ENST00000429771 1293 ntBASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 RPL13AP20-201ENST00000459725 609 ntBASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 MIR3615-201ENST00000581999 87 ntBASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD4Q5XG99 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD4Q5XG99 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD4Q5XG99 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms