Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 REXO1L1P-202ENST00000608646 1974 ntBASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 AC004987.2-201ENST00000395959 1148 ntBASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 DNAJB3-202ENST00000449667 1266 ntBASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 AL139010.1-201ENST00000454878 894 ntBASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 AC092850.2-201ENST00000623821 2697 ntBASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CBWD3Q5JTY5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CBWD3Q5JTY5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 MIR1233-2-201ENST00000408138 82 ntBASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 MIR1233-1-201ENST00000408722 82 ntBASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 AC105021.1-202ENST00000570572 669 ntBASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBWD3Q5JTY5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms