Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.74■□□□□ 0.11
SGO1Q5FBB7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SGO1Q5FBB7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SGO1Q5FBB7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SGO1Q5FBB7 ZNF259P1-201ENST00000407656 1365 ntBASIC15.74■□□□□ 0.11
SGO1Q5FBB7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.74■□□□□ 0.11
SGO1Q5FBB7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.74■□□□□ 0.11
SGO1Q5FBB7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SGO1Q5FBB7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 AP005117.1-202ENST00000581724 1908 ntBASIC15.73■□□□□ 0.11
SGO1Q5FBB7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 FDX1P1-201ENST00000449115 551 ntBASIC15.73■□□□□ 0.11
SGO1Q5FBB7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGO1Q5FBB7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 AC074386.1-202ENST00000463561 864 ntBASIC15.72■□□□□ 0.11
SGO1Q5FBB7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 AC092865.6-201ENST00000642101 219 ntBASIC15.72■□□□□ 0.11
SGO1Q5FBB7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 AC073439.1-201ENST00000624121 1774 ntBASIC15.72■□□□□ 0.11
SGO1Q5FBB7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 DBET-201ENST00000630918 3363 ntBASIC15.72■□□□□ 0.11
SGO1Q5FBB7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.72■□□□□ 0.11
SGO1Q5FBB7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 MIR940-201ENST00000401276 94 ntBASIC15.71■□□□□ 0.11
SGO1Q5FBB7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 AC068137.2-201ENST00000605408 478 ntBASIC15.71■□□□□ 0.11
SGO1Q5FBB7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.71■□□□□ 0.11
SGO1Q5FBB7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms