Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 HYMAI-201ENST00000635591 3347 ntBASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 AC254562.1-201ENST00000417586 456 ntBASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 AP006288.1-201ENST00000446065 395 ntBASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 PHKG1P2-201ENST00000457537 863 ntBASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 AC104640.1-201ENST00000562617 2109 ntBASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO1Q2MKA7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO1Q2MKA7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.19
RSPO1Q2MKA7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO1Q2MKA7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AC027612.4-201ENST00000605371 583 ntBASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AC026979.3-201ENST00000607315 403 ntBASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AC090616.6-203ENST00000579186 1945 ntBASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 AC009090.5-201ENST00000624886 2285 ntBASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RSPO1Q2MKA7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 CNN2P11-201ENST00000429351 262 ntBASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 HIST3H2BA-201ENST00000436555 524 ntBASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 AC023141.5-201ENST00000458585 616 ntBASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 MIR4453-201ENST00000584019 89 ntBASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 AC097359.3-201ENST00000603982 1210 ntBASIC13.88□□□□□ -0.19
RSPO1Q2MKA7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms