Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AL118508.1-201ENST00000613502 2345 ntBASIC19.12■□□□□ 0.65
PDS5AQ29RF7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 KRT18P43-201ENST00000469825 1281 ntBASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 AL162274.1-201ENST00000617191 1098 ntBASIC19.12■□□□□ 0.65
PDS5AQ29RF7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 PCDHA14-201ENST00000506751 2298 ntBASIC19.12■□□□□ 0.65
PDS5AQ29RF7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDS5AQ29RF7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.11■□□□□ 0.65
PDS5AQ29RF7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.11■□□□□ 0.65
PDS5AQ29RF7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AC079776.1-201ENST00000401540 1152 ntBASIC19.1■□□□□ 0.65
PDS5AQ29RF7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AC007389.4-201ENST00000454674 793 ntBASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.1■□□□□ 0.65
PDS5AQ29RF7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDS5AQ29RF7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms