Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.68■□□□□ 0.42
KCNA1Q09470 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA1Q09470 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA1Q09470 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
KCNA1Q09470 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA1Q09470 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA1Q09470 AL353705.2-201ENST00000428243 662 ntBASIC17.68■□□□□ 0.42
KCNA1Q09470 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA1Q09470 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
KCNA1Q09470 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA1Q09470 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.68■□□□□ 0.42
KCNA1Q09470 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.68■□□□□ 0.42
KCNA1Q09470 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA1Q09470 RN7SL828P-201ENST00000607615 303 ntBASIC17.68■□□□□ 0.42
KCNA1Q09470 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA1Q09470 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.68■□□□□ 0.42
KCNA1Q09470 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA1Q09470 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KCNA1Q09470 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.68■□□□□ 0.42
KCNA1Q09470 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KCNA1Q09470 AC022188.1-201ENST00000620960 1664 ntBASIC17.67■□□□□ 0.42
KCNA1Q09470 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 AL139384.1-201ENST00000612143 3047 ntBASIC17.67■□□□□ 0.42
KCNA1Q09470 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KCNA1Q09470 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA1Q09470 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.67■□□□□ 0.42
KCNA1Q09470 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.67■□□□□ 0.42
KCNA1Q09470 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA1Q09470 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.67■□□□□ 0.42
KCNA1Q09470 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KCNA1Q09470 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KCNA1Q09470 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
KCNA1Q09470 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KCNA1Q09470 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KCNA1Q09470 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KCNA1Q09470 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
KCNA1Q09470 SPDYE7P-202ENST00000420373 878 ntBASIC17.66■□□□□ 0.42
KCNA1Q09470 AL139010.1-201ENST00000454878 894 ntBASIC17.66■□□□□ 0.42
KCNA1Q09470 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNA1Q09470 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNA1Q09470 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 AP001282.1-201ENST00000531301 1499 ntBASIC17.66■□□□□ 0.42
KCNA1Q09470 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.66■□□□□ 0.42
KCNA1Q09470 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 AP005117.1-202ENST00000581724 1908 ntBASIC17.66■□□□□ 0.42
KCNA1Q09470 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.66■□□□□ 0.42
KCNA1Q09470 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.66■□□□□ 0.42
KCNA1Q09470 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
KCNA1Q09470 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNA1Q09470 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms