Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN7AQ01118 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN7AQ01118 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN7AQ01118 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.64■□□□□ 0.73
SCN7AQ01118 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN7AQ01118 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN7AQ01118 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.64■□□□□ 0.73
SCN7AQ01118 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SCN7AQ01118 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SCN7AQ01118 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SCN7AQ01118 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN7AQ01118 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SCN7AQ01118 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN7AQ01118 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN7AQ01118 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 ACKR1-201ENST00000368121 1240 ntBASIC19.63■□□□□ 0.73
SCN7AQ01118 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SCN7AQ01118 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN7AQ01118 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SCN7AQ01118 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN7AQ01118 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCN7AQ01118 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN7AQ01118 AP003171.2-201ENST00000528208 925 ntBASIC19.63■□□□□ 0.73
SCN7AQ01118 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 AP006547.1-201ENST00000563435 692 ntBASIC19.63■□□□□ 0.73
SCN7AQ01118 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN7AQ01118 AL096828.3-201ENST00000615354 462 ntBASIC19.63■□□□□ 0.73
SCN7AQ01118 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SCN7AQ01118 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.63■□□□□ 0.73
SCN7AQ01118 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.63■□□□□ 0.73
SCN7AQ01118 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN7AQ01118 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
SCN7AQ01118 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.62■□□□□ 0.73
SCN7AQ01118 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 AL591846.1-201ENST00000451736 433 ntBASIC19.62■□□□□ 0.73
SCN7AQ01118 RNA5SP423-201ENST00000517127 109 ntBASIC19.62■□□□□ 0.73
SCN7AQ01118 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 AC091271.1-201ENST00000611877 1162 ntBASIC19.62■□□□□ 0.73
SCN7AQ01118 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.62■□□□□ 0.73
SCN7AQ01118 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN7AQ01118 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN7AQ01118 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN7AQ01118 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN7AQ01118 RPSAP36-202ENST00000494591 1261 ntBASIC19.62■□□□□ 0.73
SCN7AQ01118 SCARNA20.5-201ENST00000516991 142 ntBASIC19.62■□□□□ 0.73
SCN7AQ01118 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SCN7AQ01118 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN7AQ01118 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SCN7AQ01118 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN7AQ01118 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms