Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX6-1P78426 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX6-1P78426 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX6-1P78426 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
NKX6-1P78426 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX6-1P78426 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX6-1P78426 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NKX6-1P78426 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX6-1P78426 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.27□□□□□ -0.12
NKX6-1P78426 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX6-1P78426 AC006538.1-201ENST00000567905 1585 ntBASIC14.27□□□□□ -0.12
NKX6-1P78426 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NKX6-1P78426 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX6-1P78426 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NKX6-1P78426 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-1P78426 SERBP1P5-201ENST00000510079 1181 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.27□□□□□ -0.13
NKX6-1P78426 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 ALG1L8P-201ENST00000533887 760 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-1P78426 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 AC009118.2-201ENST00000613275 655 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 AL662799.1-202ENST00000614205 422 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 MIR6752-201ENST00000618442 71 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 AC008267.7-201ENST00000624570 1194 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 AC084121.4-201ENST00000641598 221 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 AF228730.8-201ENST00000642140 221 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-1P78426 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-1P78426 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-1P78426 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 AC078925.2-201ENST00000624013 1973 ntBASIC14.27□□□□□ -0.13
NKX6-1P78426 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-1P78426 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-1P78426 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX6-1P78426 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-1P78426 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-1P78426 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX6-1P78426 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
NKX6-1P78426 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX6-1P78426 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
NKX6-1P78426 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NKX6-1P78426 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NKX6-1P78426 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NKX6-1P78426 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 NME2P1-201ENST00000426182 414 ntBASIC14.26□□□□□ -0.13
NKX6-1P78426 HLA-V-201ENST00000429037 534 ntBASIC14.26□□□□□ -0.13
NKX6-1P78426 RN7SL692P-201ENST00000464677 288 ntBASIC14.26□□□□□ -0.13
NKX6-1P78426 MEIS3P1-201ENST00000495167 958 ntBASIC14.26□□□□□ -0.13
NKX6-1P78426 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.26□□□□□ -0.13
NKX6-1P78426 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.26□□□□□ -0.13
NKX6-1P78426 AC004233.3-201ENST00000607794 1269 ntBASIC14.26□□□□□ -0.13
NKX6-1P78426 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX6-1P78426 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX6-1P78426 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.26□□□□□ -0.13
NKX6-1P78426 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX6-1P78426 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms