Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.77■□□□□ 0.6
IRX3P78415 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.77■□□□□ 0.6
IRX3P78415 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.77■□□□□ 0.6
IRX3P78415 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
IRX3P78415 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.77■□□□□ 0.6
IRX3P78415 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX3P78415 AD000864.1-201ENST00000624076 2295 ntBASIC18.77■□□□□ 0.6
IRX3P78415 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
IRX3P78415 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.77■□□□□ 0.6
IRX3P78415 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.77■□□□□ 0.59
IRX3P78415 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.77■□□□□ 0.59
IRX3P78415 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
IRX3P78415 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
IRX3P78415 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
IRX3P78415 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
IRX3P78415 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
IRX3P78415 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
IRX3P78415 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX3P78415 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
IRX3P78415 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.76■□□□□ 0.59
IRX3P78415 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.76■□□□□ 0.59
IRX3P78415 ELK1P1-201ENST00000485699 580 ntBASIC18.76■□□□□ 0.59
IRX3P78415 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.76■□□□□ 0.59
IRX3P78415 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.76■□□□□ 0.59
IRX3P78415 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
IRX3P78415 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
IRX3P78415 AC093726.1-201ENST00000608064 963 ntBASIC18.76■□□□□ 0.59
IRX3P78415 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 GGT4P-201ENST00000623672 1708 ntBASIC18.76■□□□□ 0.59
IRX3P78415 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX3P78415 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.76■□□□□ 0.59
IRX3P78415 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX3P78415 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
IRX3P78415 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX3P78415 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.75■□□□□ 0.59
IRX3P78415 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.75■□□□□ 0.59
IRX3P78415 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
IRX3P78415 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
IRX3P78415 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
IRX3P78415 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
IRX3P78415 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 MIR658-201ENST00000385210 100 ntBASIC18.75■□□□□ 0.59
IRX3P78415 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.75■□□□□ 0.59
IRX3P78415 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.75■□□□□ 0.59
IRX3P78415 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.75■□□□□ 0.59
IRX3P78415 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.75■□□□□ 0.59
IRX3P78415 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
IRX3P78415 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.75■□□□□ 0.59
IRX3P78415 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.75■□□□□ 0.59
IRX3P78415 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
IRX3P78415 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.75■□□□□ 0.59
IRX3P78415 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.75■□□□□ 0.59
IRX3P78415 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX3P78415 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
IRX3P78415 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
IRX3P78415 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IRX3P78415 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
IRX3P78415 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
IRX3P78415 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.74■□□□□ 0.59
IRX3P78415 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms