Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LIMK1P53667 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LIMK1P53667 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.87■□□□□ 0.13
LIMK1P53667 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.87■□□□□ 0.13
LIMK1P53667 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LIMK1P53667 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIMK1P53667 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
LIMK1P53667 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
LIMK1P53667 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LIMK1P53667 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIMK1P53667 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
LIMK1P53667 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.86■□□□□ 0.13
LIMK1P53667 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.86■□□□□ 0.13
LIMK1P53667 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.86■□□□□ 0.13
LIMK1P53667 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
LIMK1P53667 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.86■□□□□ 0.13
LIMK1P53667 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.86■□□□□ 0.13
LIMK1P53667 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.86■□□□□ 0.13
LIMK1P53667 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.86■□□□□ 0.13
LIMK1P53667 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.86■□□□□ 0.13
LIMK1P53667 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
LIMK1P53667 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.86■□□□□ 0.13
LIMK1P53667 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
LIMK1P53667 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
LIMK1P53667 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIMK1P53667 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK1P53667 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.85■□□□□ 0.13
LIMK1P53667 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK1P53667 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK1P53667 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK1P53667 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK1P53667 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.85■□□□□ 0.13
LIMK1P53667 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK1P53667 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.85■□□□□ 0.13
LIMK1P53667 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.85■□□□□ 0.13
LIMK1P53667 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.85■□□□□ 0.13
LIMK1P53667 AP000812.2-201ENST00000538934 718 ntBASIC15.85■□□□□ 0.13
LIMK1P53667 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 MIR5189-201ENST00000577370 114 ntBASIC15.85■□□□□ 0.13
LIMK1P53667 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LIMK1P53667 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK1P53667 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK1P53667 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK1P53667 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK1P53667 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK1P53667 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK1P53667 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK1P53667 KRT8P22-201ENST00000562317 1415 ntBASIC15.85■□□□□ 0.13
LIMK1P53667 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LIMK1P53667 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.84■□□□□ 0.13
LIMK1P53667 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LIMK1P53667 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK1P53667 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK1P53667 AL442647.2-201ENST00000429864 857 ntBASIC15.84■□□□□ 0.13
LIMK1P53667 AC007551.1-201ENST00000457394 519 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms