Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.14■□□□□ 0.49
USP11P51784 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
USP11P51784 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
USP11P51784 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP11P51784 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 AC022144.1-201ENST00000602255 1580 ntBASIC18.13■□□□□ 0.49
USP11P51784 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
USP11P51784 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.13■□□□□ 0.49
USP11P51784 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.13■□□□□ 0.49
USP11P51784 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.13■□□□□ 0.49
USP11P51784 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.13■□□□□ 0.49
USP11P51784 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.13■□□□□ 0.49
USP11P51784 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.13■□□□□ 0.49
USP11P51784 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.13■□□□□ 0.49
USP11P51784 SDHAP3-202ENST00000515467 728 ntBASIC18.13■□□□□ 0.49
USP11P51784 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.13■□□□□ 0.49
USP11P51784 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.13■□□□□ 0.49
USP11P51784 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.13■□□□□ 0.49
USP11P51784 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
USP11P51784 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 BTBD7P1-201ENST00000447253 1453 ntBASIC18.13■□□□□ 0.49
USP11P51784 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP11P51784 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.13■□□□□ 0.49
USP11P51784 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.12■□□□□ 0.49
USP11P51784 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP11P51784 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 MRPS18AP1-201ENST00000414458 589 ntBASIC18.12■□□□□ 0.49
USP11P51784 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.12■□□□□ 0.49
USP11P51784 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.12■□□□□ 0.49
USP11P51784 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.12■□□□□ 0.49
USP11P51784 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.12■□□□□ 0.49
USP11P51784 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.12■□□□□ 0.49
USP11P51784 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 AC011467.4-201ENST00000594891 528 ntBASIC18.12■□□□□ 0.49
USP11P51784 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.12■□□□□ 0.49
USP11P51784 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.12■□□□□ 0.49
USP11P51784 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
USP11P51784 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.12■□□□□ 0.49
USP11P51784 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.12■□□□□ 0.49
USP11P51784 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USP11P51784 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
USP11P51784 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP11P51784 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.11■□□□□ 0.49
USP11P51784 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.11■□□□□ 0.49
USP11P51784 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 AL139384.1-201ENST00000612143 3047 ntBASIC18.11■□□□□ 0.49
USP11P51784 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.11■□□□□ 0.49
USP11P51784 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP11P51784 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.11■□□□□ 0.49
USP11P51784 BCRP1-201ENST00000444246 691 ntBASIC18.11■□□□□ 0.49
USP11P51784 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.11■□□□□ 0.49
USP11P51784 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms