Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
NEDD4P46934 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.89■□□□□ 0.61
NEDD4P46934 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.89■□□□□ 0.61
NEDD4P46934 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NEDD4P46934 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.89■□□□□ 0.61
NEDD4P46934 MRPS18AP1-201ENST00000414458 589 ntBASIC18.89■□□□□ 0.61
NEDD4P46934 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.89■□□□□ 0.61
NEDD4P46934 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.89■□□□□ 0.61
NEDD4P46934 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.89■□□□□ 0.61
NEDD4P46934 AL033527.5-202ENST00000641632 1098 ntBASIC18.89■□□□□ 0.61
NEDD4P46934 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NEDD4P46934 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NEDD4P46934 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NEDD4P46934 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
NEDD4P46934 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.88■□□□□ 0.61
NEDD4P46934 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NEDD4P46934 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NEDD4P46934 AC087499.5-201ENST00000452760 1342 ntBASIC18.88■□□□□ 0.61
NEDD4P46934 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NEDD4P46934 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.88■□□□□ 0.61
NEDD4P46934 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.88■□□□□ 0.61
NEDD4P46934 HNRNPUP1-201ENST00000554987 333 ntBASIC18.88■□□□□ 0.61
NEDD4P46934 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
NEDD4P46934 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.88■□□□□ 0.61
NEDD4P46934 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.88■□□□□ 0.61
NEDD4P46934 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NEDD4P46934 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.88■□□□□ 0.61
NEDD4P46934 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.88■□□□□ 0.61
NEDD4P46934 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
NEDD4P46934 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NEDD4P46934 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NEDD4P46934 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NEDD4P46934 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NEDD4P46934 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.87■□□□□ 0.61
NEDD4P46934 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.87■□□□□ 0.61
NEDD4P46934 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.87■□□□□ 0.61
NEDD4P46934 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NEDD4P46934 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.87■□□□□ 0.61
NEDD4P46934 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.87■□□□□ 0.61
NEDD4P46934 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.87■□□□□ 0.61
NEDD4P46934 BASP1P1-201ENST00000430708 665 ntBASIC18.87■□□□□ 0.61
NEDD4P46934 BCRP1-201ENST00000444246 691 ntBASIC18.87■□□□□ 0.61
NEDD4P46934 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.87■□□□□ 0.61
NEDD4P46934 RN7SL618P-201ENST00000477850 296 ntBASIC18.87■□□□□ 0.61
NEDD4P46934 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.87■□□□□ 0.61
NEDD4P46934 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.87■□□□□ 0.61
NEDD4P46934 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.87■□□□□ 0.61
NEDD4P46934 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.87■□□□□ 0.61
NEDD4P46934 SPCS2P1-201ENST00000561636 679 ntBASIC18.87■□□□□ 0.61
NEDD4P46934 AC009407.1-201ENST00000568958 598 ntBASIC18.87■□□□□ 0.61
NEDD4P46934 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.87■□□□□ 0.61
NEDD4P46934 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.87■□□□□ 0.61
NEDD4P46934 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.87■□□□□ 0.61
NEDD4P46934 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NEDD4P46934 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.87■□□□□ 0.61
NEDD4P46934 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms