Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC1P35251 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC1P35251 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC1P35251 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
RFC1P35251 UPF3AP3-201ENST00000420996 769 ntBASIC17.01■□□□□ 0.31
RFC1P35251 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.01■□□□□ 0.31
RFC1P35251 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC1P35251 IGHV3-62-201ENST00000520057 340 ntBASIC17.01■□□□□ 0.31
RFC1P35251 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.01■□□□□ 0.31
RFC1P35251 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.01■□□□□ 0.31
RFC1P35251 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
RFC1P35251 AC022145.2-201ENST00000598203 171 ntBASIC17.01■□□□□ 0.31
RFC1P35251 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC1P35251 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.01■□□□□ 0.31
RFC1P35251 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 AC084121.4-201ENST00000641598 221 ntBASIC17.01■□□□□ 0.31
RFC1P35251 AF228730.8-201ENST00000642140 221 ntBASIC17.01■□□□□ 0.31
RFC1P35251 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC1P35251 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RFC1P35251 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.01■□□□□ 0.31
RFC1P35251 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RFC1P35251 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC1P35251 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17■□□□□ 0.31
RFC1P35251 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17■□□□□ 0.31
RFC1P35251 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17■□□□□ 0.31
RFC1P35251 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
RFC1P35251 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17■□□□□ 0.31
RFC1P35251 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17■□□□□ 0.31
RFC1P35251 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17■□□□□ 0.31
RFC1P35251 COA5-202ENST00000409997 557 ntTSL 4 BASIC17■□□□□ 0.31
RFC1P35251 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
RFC1P35251 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17■□□□□ 0.31
RFC1P35251 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17■□□□□ 0.31
RFC1P35251 MIR3687-2-201ENST00000577708 61 ntBASIC17■□□□□ 0.31
RFC1P35251 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17■□□□□ 0.31
RFC1P35251 MIR3687-1-201ENST00000614492 61 ntBASIC17■□□□□ 0.31
RFC1P35251 AL513210.1-201ENST00000629608 234 ntBASIC17■□□□□ 0.31
RFC1P35251 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFC1P35251 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17■□□□□ 0.31
RFC1P35251 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RFC1P35251 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17■□□□□ 0.31
RFC1P35251 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 PRAL-201ENST00000624952 3286 ntBASIC17■□□□□ 0.31
RFC1P35251 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFC1P35251 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 UXT-AS1-201ENST00000590504 1525 ntBASIC17■□□□□ 0.31
RFC1P35251 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17■□□□□ 0.31
RFC1P35251 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RFC1P35251 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 AP003680.1-201ENST00000598970 3660 ntBASIC17■□□□□ 0.31
RFC1P35251 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17■□□□□ 0.31
RFC1P35251 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFC1P35251 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFC1P35251 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC1P35251 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFC1P35251 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RFC1P35251 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms