Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RPA3P35244 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
RPA3P35244 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 AC138035.3-201ENST00000622706 2791 ntBASIC16.34■□□□□ 0.21
RPA3P35244 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPA3P35244 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RPA3P35244 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.34■□□□□ 0.21
RPA3P35244 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.34■□□□□ 0.21
RPA3P35244 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.34■□□□□ 0.21
RPA3P35244 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.34■□□□□ 0.21
RPA3P35244 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.34■□□□□ 0.21
RPA3P35244 CXCL1P1-201ENST00000502804 216 ntBASIC16.34■□□□□ 0.21
RPA3P35244 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 AC005412.3-201ENST00000580309 715 ntBASIC16.34■□□□□ 0.21
RPA3P35244 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.34■□□□□ 0.21
RPA3P35244 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.34■□□□□ 0.21
RPA3P35244 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RPA3P35244 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RPA3P35244 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.33■□□□□ 0.21
RPA3P35244 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RPA3P35244 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPA3P35244 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.33■□□□□ 0.21
RPA3P35244 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RPA3P35244 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RPA3P35244 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.33■□□□□ 0.21
RPA3P35244 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RPA3P35244 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RPA3P35244 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.33■□□□□ 0.2
RPA3P35244 MED15P5-201ENST00000423150 992 ntBASIC16.33■□□□□ 0.2
RPA3P35244 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.33■□□□□ 0.2
RPA3P35244 HCG4B-203ENST00000450128 991 ntBASIC16.33■□□□□ 0.2
RPA3P35244 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.33■□□□□ 0.2
RPA3P35244 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.33■□□□□ 0.2
RPA3P35244 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.33■□□□□ 0.2
RPA3P35244 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.33■□□□□ 0.2
RPA3P35244 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.33■□□□□ 0.2
RPA3P35244 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.33■□□□□ 0.2
RPA3P35244 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RPA3P35244 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.33■□□□□ 0.2
RPA3P35244 AC064836.3-201ENST00000607928 673 ntBASIC16.33■□□□□ 0.2
RPA3P35244 AC027601.4-201ENST00000611259 610 ntBASIC16.33■□□□□ 0.2
RPA3P35244 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.33■□□□□ 0.2
RPA3P35244 AP001350.2-201ENST00000625104 1094 ntBASIC16.33■□□□□ 0.2
RPA3P35244 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.33■□□□□ 0.2
RPA3P35244 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.33■□□□□ 0.2
RPA3P35244 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.33■□□□□ 0.2
RPA3P35244 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RPA3P35244 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RPA3P35244 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.33■□□□□ 0.2
RPA3P35244 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RPA3P35244 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPA3P35244 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RPA3P35244 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
RPA3P35244 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPA3P35244 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPA3P35244 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.32■□□□□ 0.2
RPA3P35244 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPA3P35244 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPA3P35244 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RPA3P35244 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RPA3P35244 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms