Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC11.92□□□□□ -0.5
CKS2P33552 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
CKS2P33552 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.92□□□□□ -0.5
CKS2P33552 TSPY20P-201ENST00000450910 630 ntBASIC11.92□□□□□ -0.5
CKS2P33552 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.92□□□□□ -0.5
CKS2P33552 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.92□□□□□ -0.5
CKS2P33552 MPDU1-223ENST00000582151 728 ntBASIC11.92□□□□□ -0.5
CKS2P33552 AC090616.6-201ENST00000582640 721 ntBASIC11.92□□□□□ -0.5
CKS2P33552 AC020765.3-201ENST00000613051 740 ntBASIC11.92□□□□□ -0.5
CKS2P33552 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.92□□□□□ -0.5
CKS2P33552 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CKS2P33552 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.92□□□□□ -0.5
CKS2P33552 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CKS2P33552 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
CKS2P33552 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 AL359258.3-201ENST00000622910 2331 ntBASIC11.91□□□□□ -0.5
CKS2P33552 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CKS2P33552 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 VENTXP7-201ENST00000475503 772 ntBASIC11.91□□□□□ -0.5
CKS2P33552 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.91□□□□□ -0.5
CKS2P33552 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.91□□□□□ -0.5
CKS2P33552 MIR4492-201ENST00000581627 80 ntBASIC11.91□□□□□ -0.5
CKS2P33552 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
CKS2P33552 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.91□□□□□ -0.5
CKS2P33552 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CKS2P33552 PMPCAP1-201ENST00000508114 1576 ntBASIC11.91□□□□□ -0.5
CKS2P33552 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CKS2P33552 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CKS2P33552 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CKS2P33552 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 AL592424.1-201ENST00000563624 1536 ntBASIC11.91□□□□□ -0.5
CKS2P33552 AL031595.1-201ENST00000623969 4709 ntBASIC11.91□□□□□ -0.5
CKS2P33552 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CKS2P33552 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CKS2P33552 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CKS2P33552 AC004817.3-201ENST00000602957 2129 ntBASIC11.9□□□□□ -0.5
CKS2P33552 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
CKS2P33552 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.9□□□□□ -0.5
CKS2P33552 DMBT1P1-203ENST00000636837 4628 ntBASIC11.9□□□□□ -0.5
CKS2P33552 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CKS2P33552 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CKS2P33552 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CKS2P33552 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CKS2P33552 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms