Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LSP1P33241 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSP1P33241 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.22■□□□□ 0.19
LSP1P33241 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.22■□□□□ 0.19
LSP1P33241 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.22■□□□□ 0.19
LSP1P33241 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
LSP1P33241 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.22■□□□□ 0.19
LSP1P33241 HAUS4P1-201ENST00000406739 1145 ntBASIC16.22■□□□□ 0.19
LSP1P33241 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.22■□□□□ 0.19
LSP1P33241 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.22■□□□□ 0.19
LSP1P33241 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
LSP1P33241 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LSP1P33241 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.22■□□□□ 0.19
LSP1P33241 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LSP1P33241 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 AC126755.1-201ENST00000525846 6405 ntBASIC16.22■□□□□ 0.19
LSP1P33241 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.22■□□□□ 0.19
LSP1P33241 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.22■□□□□ 0.19
LSP1P33241 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSP1P33241 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LSP1P33241 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.21■□□□□ 0.19
LSP1P33241 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.21■□□□□ 0.19
LSP1P33241 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.21■□□□□ 0.19
LSP1P33241 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 SLC22A20-204ENST00000530038 1673 ntBASIC16.21■□□□□ 0.19
LSP1P33241 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.21■□□□□ 0.19
LSP1P33241 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LSP1P33241 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.21■□□□□ 0.19
LSP1P33241 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 U82695.1-201ENST00000635752 1889 ntBASIC16.21■□□□□ 0.19
LSP1P33241 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 TERF1P1-201ENST00000311003 1181 ntBASIC16.21■□□□□ 0.19
LSP1P33241 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 AC005521.1-201ENST00000393351 872 ntBASIC16.21■□□□□ 0.19
LSP1P33241 BX664615.1-201ENST00000443558 458 ntBASIC16.21■□□□□ 0.19
LSP1P33241 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.21■□□□□ 0.19
LSP1P33241 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.21■□□□□ 0.19
LSP1P33241 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LSP1P33241 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.21■□□□□ 0.19
LSP1P33241 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.21■□□□□ 0.19
LSP1P33241 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
LSP1P33241 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
LSP1P33241 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LSP1P33241 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSP1P33241 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
LSP1P33241 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LSP1P33241 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.2■□□□□ 0.18
LSP1P33241 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.2■□□□□ 0.18
LSP1P33241 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.2■□□□□ 0.18
LSP1P33241 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSP1P33241 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.2■□□□□ 0.18
LSP1P33241 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.2■□□□□ 0.18
LSP1P33241 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms