Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXA6P31267 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXA6P31267 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HOXA6P31267 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
HOXA6P31267 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.7■□□□□ 0.1
HOXA6P31267 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXA6P31267 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HOXA6P31267 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXA6P31267 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HOXA6P31267 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HOXA6P31267 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 AC015818.8-201ENST00000587907 1519 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 AC060834.1-201ENST00000443027 2032 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
HOXA6P31267 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 FAM197Y7-201ENST00000432892 766 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 AC007969.1-201ENST00000433675 447 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.69■□□□□ 0.1
HOXA6P31267 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 GAPDHP40-201ENST00000505218 1006 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 AC005695.3-201ENST00000614522 232 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 AC138951.2-201ENST00000623455 1161 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
HOXA6P31267 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HOXA6P31267 AL138709.1-201ENST00000614840 1693 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.69■□□□□ 0.1
HOXA6P31267 REXO1L1P-202ENST00000608646 1974 ntBASIC15.69■□□□□ 0.1
HOXA6P31267 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
HOXA6P31267 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HOXA6P31267 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HOXA6P31267 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 AL662890.1-201ENST00000396818 632 ntBASIC15.68■□□□□ 0.1
HOXA6P31267 AL133267.1-201ENST00000398220 340 ntBASIC15.68■□□□□ 0.1
HOXA6P31267 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.68■□□□□ 0.1
HOXA6P31267 RNA5SP486-201ENST00000515961 83 ntBASIC15.68■□□□□ 0.1
HOXA6P31267 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 EEF1DP1-201ENST00000585891 896 ntBASIC15.68■□□□□ 0.1
HOXA6P31267 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 AC107373.2-201ENST00000607735 490 ntBASIC15.68■□□□□ 0.1
HOXA6P31267 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 AC006453.4-201ENST00000636949 1252 ntBASIC15.68■□□□□ 0.1
HOXA6P31267 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HOXA6P31267 PP12613-201ENST00000424958 2230 ntBASIC15.68■□□□□ 0.1
HOXA6P31267 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HOXA6P31267 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HOXA6P31267 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA6P31267 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA6P31267 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HOXA6P31267 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms